收稿日期: 2014-06-21
网络出版日期: 2014-12-20
Application of random amplified polymorphic DNA for species identification and origin determination of imported rodents
Received date: 2014-06-21
Online published: 2014-12-20
目的 研究如何运用随机扩增多态DNA(RAPD)技术判定鼠类种属及来源。方法 取鼠尾组织制备DNA基因组,并进行RAPD扩增,以强带差异来区分鼠类遗传多态性。结果 建立了褐家鼠DNA快速制备方法,并获得基因图谱。根据120条引物各自表现出的不同多态性,合成一组褐家鼠的通用引物,定名为P1(5'-TCG GCG GTT C-3')、P2(5'-GAG AGC CGT C-3')、P3(5'-ATG GCA TCT C-3')和P4(5'-CTT GGC ACG A-3'),结果显示,该组引物对褐家鼠在目的片段(925 bp)处均有良好的扩增。结论 分析个体DNA序列同源程度判断遗传距离大小,可鉴别鼠的来源是否为输入性鼠类,对追溯某种鼠类扩散途径和历史以及预警鼠传疾病提供科学依据。
杨志俊, 胡云 . 随机扩增多态DNA技术在鼠类种属来源判定中的应用研究[J]. 中国媒介生物学及控制杂志, 2014 , 25(6) : 581 -583 . DOI: 10.11853/j.issn.1003.4692.2014.06.027
Objective To use random amplified polymorphic DNA (RAPD) for species identification and origin determination of imported rodents. Methods Genetic DNA of rodents was extracted from tail tissue specimens and amplified by RAPD. Genetic polymorphisms in rodents were distinguished by differences in strong RAPD banding patterns. Results A quick DNA preparation method for sewer rats and their genetic maps were established. In accordance with different polymorphisms of 120 primers, a set of universal primers for sewer rats were synthesized, designated P1 (5'-TCG GCG GTT C-3'), P2 (5'-GAG AGC CGT C-3'), P3 (5'-ATG GCA TCT C-3'), and P4 (5'-CTT GGC ACG A-3'). Amplification of a target fragment (925 bp) in sewer rats using the universal primers all yielded good results. Conclusion Analysis of the degree of homology between individual DNA sequences and determination of their genetic distance allow identifying the origin of rodents as imported or not. The obtained data provide a reference for tracing the dispersal path and history of rodents and detecting early-warning signs of rodent-borne diseases.
[1] 徐海根,强胜,韩正敏. 中国外来入侵物种的分布与传入路径分析[J]. 生物多样性,2004,12(6):626-638.
[2] Williams JGK, Kubelik AR, Livak J, et al. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers[J]. Nucleic Acids Res,1990,18(12):6531-6535.
[3] Nei M, Li WH. Mathematical model for studying genetic variation in terms of restriction endonucleases[J]. Proc Natl Acad Sci USA,1997,76(10):5269-5273.
[4] 李菁菁,张亚平. 小家鼠的遗传与进化研究进展[J]. 动物学研究,2001,22(5):406-412.
[5] 李淑蓉,陈意生,魏泓. 应用RAPD引物区分小鼠品系[J]. 第三军医大学学报,2010,23(8):951-953.
[6] 雷建,华欣欣,周鑫. 河南地方野生小鼠与近交系小鼠的RAPD分析[J]. 河南农业科学,2010,12(5):105-108.
/
| 〈 |
|
〉 |